Add a software (name) property to firecrest, ipar, bustard, gerald

[htsworkflow.git] / htsworkflow / pipelines / test / test_runfolder_ipar100.py

diff --git a/htsworkflow/pipelines/test/test_runfolder_ipar100.py b/htsworkflow/pipelines/test/test_runfolder_ipar100.py
index ec647b83e8523c0cf57713ad7770a8edbd26b03a..7913ed079a045c64e910a51addf625a4132c223b 100644 (file)
--- a/htsworkflow/pipelines/test/test_runfolder_ipar100.py
+++ b/htsworkflow/pipelines/test/test_runfolder_ipar100.py
@@ -75,6 +75,7 @@ class RunfolderTests(unittest.TestCase):
         Construct a firecrest object
         """
         i = ipar.ipar(self.image_analysis_dir)
+        self.failUnlessEqual(i.software, 'IPAR')
         self.failUnlessEqual(i.version, '2.01.192.0')
         self.failUnlessEqual(i.start, 1)
         self.failUnlessEqual(i.stop, 37)
@@ -84,6 +85,7 @@ class RunfolderTests(unittest.TestCase):
         xml_str = ElementTree.tostring(xml)
 
         i2 = ipar.IPAR(xml=xml)
+        self.failUnlessEqual(i.software, i2.software)
         self.failUnlessEqual(i.version, i2.version)
         self.failUnlessEqual(i.start,   i2.start)
         self.failUnlessEqual(i.stop,    i2.stop)
@@ -95,6 +97,7 @@ class RunfolderTests(unittest.TestCase):
         construct a bustard object
         """
         b = bustard.bustard(self.bustard_dir)
+        self.failUnlessEqual(b.software, 'Bustard')
         self.failUnlessEqual(b.version, '1.8.28')
         self.failUnlessEqual(b.date,    date(2008,4,12))
         self.failUnlessEqual(b.user,    'diane')
@@ -103,6 +106,7 @@ class RunfolderTests(unittest.TestCase):
 
         xml = b.get_elements()
         b2 = bustard.Bustard(xml=xml)
+        self.failUnlessEqual(b.software, b2.software)
         self.failUnlessEqual(b.version, b2.version)
         self.failUnlessEqual(b.date,    b2.date )
         self.failUnlessEqual(b.user,    b2.user)
@@ -119,6 +123,7 @@ class RunfolderTests(unittest.TestCase):
         # need to update gerald and make tests for it
         g = gerald.gerald(self.gerald_dir)
 
+        self.failUnlessEqual(g.software, 'GERALD')
         self.failUnlessEqual(g.version, '1.171')
         self.failUnlessEqual(g.date, datetime(2009,2,22,21,15,59))
         self.failUnlessEqual(len(g.lanes), len(g.lanes.keys()))
@@ -172,6 +177,7 @@ class RunfolderTests(unittest.TestCase):
         g2 = gerald.Gerald(xml=xml)
 
         # do it all again after extracting from the xml file
+        self.failUnlessEqual(g.software, g2.software)
         self.failUnlessEqual(g.version, g2.version)
         self.failUnlessEqual(g.date, g2.date)
         self.failUnlessEqual(len(g.lanes.keys()), len(g2.lanes.keys()))