Merge changing lane_number to string and sequence finding code changes

[htsworkflow.git] / htsworkflow / submission / geo.py

diff --git a/htsworkflow/submission/geo.py b/htsworkflow/submission/geo.py
index 413d2c3ae5e99daa7025a6be3101edb50d96da85..85947158390f699afa8a76cd719a0b1fadf26ebf 100644 (file)
--- a/htsworkflow/submission/geo.py
+++ b/htsworkflow/submission/geo.py
@@ -111,7 +111,7 @@ class GEOSubmission(Submission):
 
         context = Context({
             'submission': str(analysis_node.uri),
-            'file_class': str(geoSoftNS['supplemental'])
+            'file_class': str(geoSoftNS['supplemental'].uri)
             })
 
         return self.execute_query(query_template, context)
@@ -123,7 +123,7 @@ class GEOSubmission(Submission):
 
         context = Context({
             'submission': str(analysis_node.uri),
-            'file_class': str(geoSoftNS['raw']),
+            'file_class': str(geoSoftNS['raw'].uri),
             })
 
         lanes = {}