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(parent: 1d5d5fa) | patch
Create a class to convert contig names into genome/contig names
authorDiane Trout <diane@caltech.edu>
Tue, 10 Jul 2012 23:38:20 +0000 (16:38 -0700)
committerDiane Trout <diane@caltech.edu>
Tue, 10 Jul 2012 23:38:20 +0000 (16:38 -0700)
commit439cf073ac47867e7175294e98b725ff16a17aac
treed3b05e18504dbefe4c30e87e2ba9f624d360a7e6tree | snapshot
parent1d5d5faa13018584e2cd57682bd03c1b9807b238commit | diff
Create a class to convert contig names into genome/contig names
And now being split out I can reasonably test it.
This is needed so when we're reporting where the genome
locations mapped to we can summarize them as a genome
instead of chr1 chr2 chr3 etc.
htsworkflow/pipelines/eland.py diff | blob | history
htsworkflow/pipelines/genomemap.py [new file with mode: 0644] blob
htsworkflow/pipelines/test/test_genomemap.py [new file with mode: 0644] blob
htsworkflow sequencing LIMS software