Replace '.' with 'N' in the sequence from qseq files.
authorDiane Trout <diane@caltech.edu>
Tue, 1 Dec 2009 22:19:10 +0000 (22:19 +0000)
committerDiane Trout <diane@caltech.edu>
Tue, 1 Dec 2009 22:19:10 +0000 (22:19 +0000)
commit5672775e89a36cac2d8ae71148e0a701a16f2801
treefb5ee32e777fbabadaba5bf38ad500fd68ab1969
parentcf84b54d691e01bb7624162d82ea4646020d7230
Replace '.' with 'N' in the sequence from qseq files.
Also add an option to include the pass filter state in the header
(and a small code reorganization)
scripts/qseq2fastq