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(parent: a04df0f) | patch
Implement writing to compressed files for qseq2fastq
authorDiane Trout <diane@ghic.org>
Tue, 21 Jun 2016 21:30:50 +0000 (14:30 -0700)
committerDiane Trout <diane@ghic.org>
Tue, 21 Jun 2016 21:30:50 +0000 (14:30 -0700)
commit573b1e154e8f621c1d60b0e008101d4bec19de11
treedb41af62e8113c422e696b688b44acdde159ee84tree | snapshot
parenta04df0f8e3c1faebbd3965ec2e887f8ab36b437bcommit | diff
Implement writing to compressed files for qseq2fastq

Along the way refactor some of the code I had in
desplit_fastq to make it easier to share the open compressed
streams logic
htsworkflow/pipelines/desplit_fastq.py diff | blob | history
htsworkflow/pipelines/qseq2fastq.py diff | blob | history
htsworkflow/submission/condorfastq.py diff | blob | history
htsworkflow sequencing LIMS software