Add script to try and build submissions to the UCSC encode project.
authorDiane Trout <diane@caltech.edu>
Thu, 10 Jun 2010 00:55:11 +0000 (00:55 +0000)
committerDiane Trout <diane@caltech.edu>
Thu, 10 Jun 2010 00:55:11 +0000 (00:55 +0000)
commit78482b7a2ffed37ff0e2c9dcc6c2d266ce614e4f
tree4a52ce758b95f69c0b07ce22a8dd0b891d2b11d0
parent1e43073b3a6031ff8677b9da4ddbdf75ac9dc380
Add script to try and build submissions to the UCSC encode project.

This version supports generating qseq2fastq entries using the
htsworkflow api and scanning the flowcell repository directory.

There was code to generate the ddf files (from ini files).

I need to update the ini generation code to scan the submisison directory
for fastq files and group them by read.
extra/README.txt [new file with mode: 0644]
extra/ucsc_encode_submission/README.txt [new file with mode: 0644]
extra/ucsc_encode_submission/ucsc_gather.py [new file with mode: 0755]