GEO wanted both files for a paired lane to be on a single line.
authorDiane Trout <diane@caltech.edu>
Wed, 1 Aug 2012 23:18:13 +0000 (16:18 -0700)
committerDiane Trout <diane@caltech.edu>
Wed, 1 Aug 2012 23:18:13 +0000 (16:18 -0700)
commitb20de36b64c3de26b259c55c65a84d2f1513124d
tree8c9f05f4a5952f5c4b0c1dea31dac7d95fc5d379
parent273e9e961c4c26fae88b1e7f2e4567d304cb835c
GEO wanted both files for a paired lane to be on a single line.
This required a bit of formatting code to massage the
results of the sparql query into an acceptable form.
htsworkflow/submission/geo.py
htsworkflow/templates/geo_fastqs.sparql [new file with mode: 0644]
htsworkflow/templates/geo_files.sparql
htsworkflow/templates/geo_run_details.sparql
htsworkflow/templates/geo_submission.soft