Update the 'flowcell started' email message to include the sequencer

in the url.

diff --git a/htsworkflow/frontend/templates/experiments/started_email.html b/htsworkflow/frontend/templates/experiments/started_email.html
index dcb2df0c36aae883257559ec273bb57e1a7ebf7f..180cde6aadad4313a62382878e7e9dc74e5d9eef 100644 (file)
--- a/htsworkflow/frontend/templates/experiments/started_email.html
+++ b/htsworkflow/frontend/templates/experiments/started_email.html
@@ -14,6 +14,6 @@ the pipeline finishes, probably in about {{ finish_low.days }} to {{ finish_high
 days from {{ now|date:"D, M d Y" }}
 </p>
 <p>
-<a href="https://jumpgate.caltech.edu/runfolders/cellcenter/">
-https://jumpgate.caltech.edu/runfolders/cellcenter/
+<a href="https://jumpgate.caltech.edu/runfolders/{{ flowcell.sequencer}}/">
+https://jumpgate.caltech.edu/runfolders/{{ flowcell.sequencer }}
 </a></p>

diff --git a/htsworkflow/frontend/templates/experiments/started_email.txt b/htsworkflow/frontend/templates/experiments/started_email.txt
index a388dc46b703190984d82d319725882a322988a8..7337ef81f122e17b2ffed0cc3ec634203425e4b3 100644 (file)
--- a/htsworkflow/frontend/templates/experiments/started_email.txt
+++ b/htsworkflow/frontend/templates/experiments/started_email.txt
@@ -11,7 +11,7 @@ The raw data should be available at the following link when the
 pipeline finishes, probably in about {{ finish_low.days }} to {{ finish_high.days }} 
 days from {{ now|date:"D, M d Y" }}
 
-https://jumpgate.caltech.edu/runfolders/cellcenter/
+https://jumpgate.caltech.edu/runfolders/{{ flowcell.sequencer}}
 
 Username: gec
 Password: gecilluminadata