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remove some trailing whitespace
author
Diane Trout
<diane@ghic.org>
Wed, 15 Jan 2014 01:01:18 +0000
(17:01 -0800)
committer
Diane Trout
<diane@ghic.org>
Wed, 15 Jan 2014 01:01:18 +0000
(17:01 -0800)
htsworkflow/submission/submission.py
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diff --git
a/htsworkflow/submission/submission.py
b/htsworkflow/submission/submission.py
index 5077996b8abb535e8aeb9bae2409d0f0f2fede09..897053fbc148477c108d232635958db45488dfc5 100644
(file)
--- a/
htsworkflow/submission/submission.py
+++ b/
htsworkflow/submission/submission.py
@@
-133,7
+133,7
@@
class Submission(object):
RDF.Statement(fileNode,
libraryOntology['library'],
libNode))
RDF.Statement(fileNode,
libraryOntology['library'],
libNode))
-
+
LOGGER.debug("Done.")
def make_file_node(self, pathname, submissionNode):
LOGGER.debug("Done.")
def make_file_node(self, pathname, submissionNode):
@@
-175,7
+175,7
@@
class Submission(object):
except ValueError:
# currently its just ignore it if the fastq name parser fails
return
except ValueError:
# currently its just ignore it if the fastq name parser fails
return
-
+
terms = [('flowcell', libraryOntology['flowcell_id']),
('lib_id', libraryOntology['library_id']),
('lane', libraryOntology['lane_number']),
terms = [('flowcell', libraryOntology['flowcell_id']),
('lib_id', libraryOntology['library_id']),
('lane', libraryOntology['lane_number']),
@@
-186,7
+186,7
@@
class Submission(object):
if value is not None:
s = RDF.Statement(fileNode, model_term, toTypedNode(value))
self.model.append(s)
if value is not None:
s = RDF.Statement(fileNode, model_term, toTypedNode(value))
self.model.append(s)
-
+
def add_label(self, file_type, file_node, lib_node):
"""Add rdfs:label to a file node
"""
def add_label(self, file_type, file_node, lib_node):
"""Add rdfs:label to a file node
"""