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update url to new standard url
author
Diane Trout
<diane@ghic.org>
Tue, 27 Oct 2015 18:18:17 +0000
(11:18 -0700)
committer
Diane Trout
<diane@ghic.org>
Tue, 27 Oct 2015 18:18:17 +0000
(11:18 -0700)
htsworkflow/submission/test/test_encoded.py
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diff --git
a/htsworkflow/submission/test/test_encoded.py
b/htsworkflow/submission/test/test_encoded.py
index 618f6c9bda999c146f4c9142dc184847266bdab0..87b5140f6a6ecc80e43c29349cc49a8cc4da24da 100644
(file)
--- a/
htsworkflow/submission/test/test_encoded.py
+++ b/
htsworkflow/submission/test/test_encoded.py
@@
-12,14
+12,14
@@
from htsworkflow.submission.encoded import (ENCODED,
class TestEncoded(TestCase):
def test_prepare_url(self):
class TestEncoded(TestCase):
def test_prepare_url(self):
- encode = ENCODED('
test.encodedcc.edu
')
+ encode = ENCODED('
www.encodeproject.org
')
tests = [
tests = [
- ('/experiments', 'https://
test.encodedcc.edu
/experiments'),
+ ('/experiments', 'https://
www.encodeproject.org
/experiments'),
('/experiments/ENCLB045ZZZ',
('/experiments/ENCLB045ZZZ',
- 'https://
test.encodedcc.edu
/experiments/ENCLB045ZZZ'),
- ('https://www.encode
dcc.edu
/experiments/ENCLB045ZZZ',
- 'https://www.encode
dcc.edu
/experiments/ENCLB045ZZZ'),
+ 'https://
www.encodeproject.org
/experiments/ENCLB045ZZZ'),
+ ('https://www.encode
project.org
/experiments/ENCLB045ZZZ',
+ 'https://www.encode
project.org
/experiments/ENCLB045ZZZ'),
]
for url, result in tests:
self.assertEqual(encode.prepare_url(url), result)
]
for url, result in tests:
self.assertEqual(encode.prepare_url(url), result)
@@
-64,7
+64,7
@@
class TestEncoded(TestCase):
linked_id = {'@type': '@id'}
library = { '@id': '/libraries/1234', '@type': ['Library', 'Item'] }
linked_id = {'@type': '@id'}
library = { '@id': '/libraries/1234', '@type': ['Library', 'Item'] }
- encode = ENCODED('
test.encodedcc
.org')
+ encode = ENCODED('
www.encodeproject
.org')
url = encode.prepare_url(library['@id'])
context = encode.create_jsonld_context(library, url)
self.assertEqual(context['@vocab'], 'https://www.encodeproject.org/profiles/Library.json#')
url = encode.prepare_url(library['@id'])
context = encode.create_jsonld_context(library, url)
self.assertEqual(context['@vocab'], 'https://www.encodeproject.org/profiles/Library.json#')
@@
-107,7
+107,7
@@
class TestEncoded(TestCase):
},
}
},
}
- encode = ENCODED('
test.encodedcc
.org')
+ encode = ENCODED('
www.encodeproject
.org')
bio_base = encode.prepare_url(obj['biosample']['@id'])
url = encode.prepare_url('/libraries/ENCLB044ZZZ/?format=json&embed=False')
bio_base = encode.prepare_url(obj['biosample']['@id'])
url = encode.prepare_url('/libraries/ENCLB044ZZZ/?format=json&embed=False')
@@
-164,7
+164,7
@@
class TestEncoded(TestCase):
u'treatments.length': []},
]}
u'treatments.length': []},
]}
- encode = ENCODED('
test.encodedcc
.org')
+ encode = ENCODED('
www.encodeproject
.org')
result = encode.convert_search_to_jsonld(example)
for obj in result['@graph']:
self.assertNotIn('award.rfa', obj)
result = encode.convert_search_to_jsonld(example)
for obj in result['@graph']:
self.assertNotIn('award.rfa', obj)