- cnt = R1.aligned_m_reads()[1]
- if cnt > 0:
- str += "<div style='background-color:"+getBgColor(cnt,EXP)+";border:solid #cccccc 1px;font-size:140%'>"
- str += "%1.2f" % (cnt/1000000.0)+" M"
- else: str += "<div style='background-color:#ff3300;border:solid #cccccc 1px;width:100%;font-size:140%'>0 Reads"
+ rres = R1.aligned_m_reads()
+ # Check data sanlty
+ if rres[2] != 'OK':
+ str += '<div style="border:solid red 2px">'+rres[2]
+ else:
+ cnt = rres[1]
+ if cnt > 0:
+ str += "<div style='background-color:"+getBgColor(cnt,EXP)+";border:solid #cccccc 1px;font-size:140%'>"
+ str += "%1.2f" % (cnt/1000000.0)+" M"
+ else: str += "<div style='background-color:#ff3300;border:solid #cccccc 1px;width:100%;font-size:140%'>0 Reads"