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Add a log message to for debugging
author
Diane Trout
<diane@caltech.edu>
Mon, 24 Sep 2012 23:37:30 +0000
(16:37 -0700)
committer
Diane Trout
<diane@caltech.edu>
Mon, 24 Sep 2012 23:37:30 +0000
(16:37 -0700)
encode_submission/geo_gather.py
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diff --git
a/encode_submission/geo_gather.py
b/encode_submission/geo_gather.py
index c67edefc7d45d0e95e7a798dd015a31befbbbac2..9db286d37b6326e1b576e1045a3c04b5e92beabe 100644
(file)
--- a/
encode_submission/geo_gather.py
+++ b/
encode_submission/geo_gather.py
@@
-77,6
+77,7
@@
def main(cmdline=None):
results.make_tree_from(opts.make_tree_from)
if opts.fastq:
+ logger.info("Building fastq extraction scripts")
flowcells = os.path.join(opts.sequence, 'flowcells')
extractor = CondorFastqExtract(opts.host, flowcells,
model=opts.model,