projects
/
htsworkflow.git
/ commitdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
| commitdiff |
tree
raw
|
patch
| inline |
side by side
(parent:
264ecc1
)
whitespace reformatting
author
Diane Trout
<diane@caltech.edu>
Tue, 20 Dec 2011 18:52:37 +0000
(10:52 -0800)
committer
Diane Trout
<diane@caltech.edu>
Tue, 20 Dec 2011 18:52:37 +0000
(10:52 -0800)
htsworkflow/pipelines/srf2fastq.py
patch
|
blob
|
history
diff --git
a/htsworkflow/pipelines/srf2fastq.py
b/htsworkflow/pipelines/srf2fastq.py
index c73bb2cc3f93953de73210a751dfd9f463c8b832..ab86342ce6d2108a95811cfb5f9a134f17affc6d 100755
(executable)
--- a/
htsworkflow/pipelines/srf2fastq.py
+++ b/
htsworkflow/pipelines/srf2fastq.py
@@
-103,7
+103,6
@@
def srf_open(filename, srf2fastq_cmd, cnf1=False):
def convert_single_to_fastq(instream, target1, header=''):
-
state = FASTQ_HEADER
for line in instream:
line = line.strip()