return '<div style="border:solid red 2px">'+res[2]+'</div>'
rc = "%1.2f" % (res[1]/1000000.0)
# Color Scheme: green is more than 12M, blue is more than 5M, orange is more than 3M and red is less. For RNAseq, all those thresholds should be doubled
if res[2] != 'OK':
return '<div style="border:solid red 2px">'+res[2]+'</div>'
rc = "%1.2f" % (res[1]/1000000.0)
# Color Scheme: green is more than 12M, blue is more than 5M, orange is more than 3M and red is less. For RNAseq, all those thresholds should be doubled
- if res[0] > 0:
- bgcolor = '#FFCDD0' # Red, the color for minimum read count
- rc_thr = [12000000,5000000,3000000]
- if self.experiment_type == 'RNA-seq':
- rc_thr = [20000000,10000000,6000000]
+ bgcolor = '#FFCDD0' # Red, the color for minimum read count