# provide common defaults.
None: {
# terms in multiple encoded objects
+ 'award': { '@type': '@id' },
+ 'dataset': {'@type': '@id'},
'description': 'rdf:description',
+ 'documents': { '@type': '@id' },
'experiment': {'@type': '@id'},
'href': { '@type': '@id' },
'lab': { '@type': '@id' },
'library': {'@type': '@id' },
'pi': { '@type': '@id' },
'platform': { '@type': '@id' },
+ 'replicates': { '@type': '@id' },
'submitted_by': { '@type': '@id' },
'url': { '@type': '@id' },
},
},
'experiment': {
"assay_term_id": { "@type": "@id" },
- },
- 'file': {
- 'dataset': {'@type': '@id'},
+ "files": { "@type": "@id" },
+ "original_files": { "@type": "@id"},
},
# I tried to use the JSON-LD mapping capabilities to convert the lab
# contact information into a vcard record, but the encoded model
# "state": "vcard:region",
# "country": "vcard:country"
#},
- 'human_donor': {
- 'award': { '@type': '@id' },
- },
'library': {
- 'award': { '@type': '@id' },
'nucleic_acid_term_id': { '@type': '@id' }
}
}
# OBI: available from http://svn.code.sf.net/p/obi/code/releases/2012-07-01/merged/merged-obi-comments.owl
'SO': 'http://purl.obolibrary.org/obo/SO_', # Sequence ontology
# SO: available from http://www.berkeleybop.org/ontologies/so.owl
+ # NTR: New Term Request space for DCC to implement new ontology terms
}