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Remove some debug prints
author
Diane Trout
<diane@caltech.edu>
Thu, 1 Mar 2012 23:09:19 +0000
(15:09 -0800)
committer
Diane Trout
<diane@caltech.edu>
Thu, 1 Mar 2012 23:09:19 +0000
(15:09 -0800)
htsworkflow/pipelines/test/simulate_runfolder.py
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diff --git
a/htsworkflow/pipelines/test/simulate_runfolder.py
b/htsworkflow/pipelines/test/simulate_runfolder.py
index 0b57631e58f5cb53696968f0feafe23dc947fbcd..42cf421587b227bc466b8248e4b58124a775ac65 100644
(file)
--- a/
htsworkflow/pipelines/test/simulate_runfolder.py
+++ b/
htsworkflow/pipelines/test/simulate_runfolder.py
@@
-582,7
+582,6
@@
class DemultiplexedPaths(object):
self.sample_dir = os.path.join(self.project_dir, self.sample_dir)
self.summary_dir = 'Summary_Stats_{0}'.format(self.flowcell_id)
self.summary_dir = os.path.join(self.project_dir, self.summary_dir)
self.sample_dir = os.path.join(self.project_dir, self.sample_dir)
self.summary_dir = 'Summary_Stats_{0}'.format(self.flowcell_id)
self.summary_dir = os.path.join(self.project_dir, self.summary_dir)
- print "HI:", self.summary_dir
def make_sample_dirs(self):
def make_sample_dirs(self):
@@
-592,7
+591,6
@@
class DemultiplexedPaths(object):
os.mkdir(self.sample_dir)
def make_summary_dirs(self):
os.mkdir(self.sample_dir)
def make_summary_dirs(self):
- print "HI:", self.summary_dir
if not os.path.isdir(self.summary_dir):
os.mkdir(self.summary_dir)
if not os.path.isdir(self.summary_dir):
os.mkdir(self.summary_dir)
@@
-600,6
+598,7
@@
class DemultiplexedPaths(object):
filename = self.rootname + suffix
pathname = os.path.join(self.sample_dir, filename)
return pathname
filename = self.rootname + suffix
pathname = os.path.join(self.sample_dir, filename)
return pathname
+
def dump(self):
print ('index seq: {0}'.format(self.index_seq))
def dump(self):
print ('index seq: {0}'.format(self.index_seq))