remove unused imports and variables

diff --git a/htsworkflow/submission/aws_submission.py b/htsworkflow/submission/aws_submission.py
index 4cf98cb801afe26d222281124ddf8a1198fc4ad2..17abcbbcfc36344e98701d0ce8fa205c2ca85005 100644 (file)
--- a/htsworkflow/submission/aws_submission.py
+++ b/htsworkflow/submission/aws_submission.py
@@ -5,24 +5,14 @@ import logging
 import json
 import os
 from pprint import pformat, pprint
-import string
 import subprocess
 import time
-import re
 
-import jsonschema
-import RDF
 from requests.exceptions import HTTPError
 
 from htsworkflow.submission.submission import Submission
 from .encoded import ENCODED
-from htsworkflow.util.rdfhelp import \
-     fromTypedNode, \
-     geoSoftNS, \
-     submissionOntology
-from htsworkflow.util.ucsc import bigWigInfo
 
-from django.conf import settings
 from django.template import Context, loader
 
 LOGGER = logging.getLogger(__name__)

diff --git a/htsworkflow/submission/submission.py b/htsworkflow/submission/submission.py
index c70aece073b1c2e40f76548d18e8cdd227a05901..70c6dc5ec73091b914b0d6de3a9714b8fc53f753 100644 (file)
--- a/htsworkflow/submission/submission.py
+++ b/htsworkflow/submission/submission.py
@@ -22,7 +22,6 @@ from htsworkflow.submission.daf import \
      get_submission_uri
 from htsworkflow.util import opener
 
-from django.conf import settings
 from django.template import Context, Template, loader
 
 LOGGER = logging.getLogger(__name__)
@@ -88,7 +87,6 @@ class Submission(object):
 
         an_analysis_name = self.make_submission_name(analysis_dir)
         an_analysis = self.get_submission_node(analysis_dir)
-        an_analysis_uri = str(an_analysis.uri)
         file_classification = self.model.get_target(file_type,
                                                     rdfNS['type'])
         if file_classification is None: