update more raise exceptions to Exception(message) syntax

diff --git a/htsworkflow/pipelines/genome_mapper.py b/htsworkflow/pipelines/genome_mapper.py
index fc70590d73247c78ab7f57370eadf63b31db0835..a080e5773777664a038ca2b2bcca22f4ab9fb1eb 100644 (file)
--- a/htsworkflow/pipelines/genome_mapper.py
+++ b/htsworkflow/pipelines/genome_mapper.py
@@ -60,7 +60,7 @@ def getAvailableGenomes(genome_base_dir):
     build_dict = d.setdefault(species, {})
     if build in build_dict:
       msg = "Duplicate genome for %s|%s" % (species, build)
-      raise DuplicateGenome, msg
+      raise DuplicateGenome(msg)
 
     build_dict[build] = genome_dir
 

diff --git a/inventory/views.py b/inventory/views.py
index 23b720017cf4b73b5cb60ccbc004f2ca3e784312..63f91a04634ad326329c26dc6e3b8e08469c7cb2 100644 (file)
--- a/inventory/views.py
+++ b/inventory/views.py
@@ -90,7 +90,7 @@ def getPrinterTemplateByType(item_type):
             printer_template = PrinterTemplate.objects.get(default=True)
         except ObjectDoesNotExist:
             msg = "No template for item type (%s) and no default template found" % (item_type.name)
-            raise ValueError, msg
+            raise ValueError(msg)
 
         return printer_template
 
@@ -334,7 +334,7 @@ def link_flowcell_and_device(request, flowcell, serial):
     lts = None
     if count > 1:
         msg = "There really should only be one longtermstorage object per flowcell"
-        raise ValueError, msg
+        raise ValueError(msg)
     elif count == 1:
         # lts already attached to flowcell
         lts = fc.longtermstorage_set.all()[0]