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gaworkflow to htswdataprod package fix.
author
Brandon King
<kingb@caltech.edu>
Thu, 7 Aug 2008 22:37:57 +0000
(22:37 +0000)
committer
Brandon King
<kingb@caltech.edu>
Thu, 7 Aug 2008 22:37:57 +0000
(22:37 +0000)
htswdataprod/htswdataprod/runfolder.py
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diff --git
a/htswdataprod/htswdataprod/runfolder.py
b/htswdataprod/htswdataprod/runfolder.py
index 2bf55bdb9eddaeba42cb7dfe651dd9d5659cc351..7682d7c18f1b9ec2bb58a4cafb8746bc8a4c4090 100644
(file)
--- a/
htswdataprod/htswdataprod/runfolder.py
+++ b/
htswdataprod/htswdataprod/runfolder.py
@@
-141,9
+141,9
@@
def get_runs(runfolder):
generate two different PipelineRun objects, that differ
in there gerald component.
"""
- from
gaworkflow.pipeline
import firecrest
- from
gaworkflow.pipeline
import bustard
- from
gaworkflow.pipeline
import gerald
+ from
htswdataprod.illumina
import firecrest
+ from
htswdataprod.illumina
import bustard
+ from
htswdataprod.illumina
import gerald
datadir = os.path.join(runfolder, 'Data')