indicate we want text not bytes

diff --git a/htsworkflow/pipelines/desplit_fastq.py b/htsworkflow/pipelines/desplit_fastq.py
index b6d740c33df351388c21739b28e522a675dea249..6fe8d0720f83ec592c555eaf8958426192dcf8de 100644 (file)
--- a/htsworkflow/pipelines/desplit_fastq.py
+++ b/htsworkflow/pipelines/desplit_fastq.py
@@ -71,7 +71,7 @@ def file_generator(pattern_list):
     """
     for pattern in pattern_list:
         for filename in glob(pattern):
-            yield autoopen(filename, 'r')
+            yield autoopen(filename, 'rt')
 
 
 class DesplitFastq(object):