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mark the example submission rule files as being raw, so the escapes dont get confused
[htsworkflow.git]
/
htsworkflow
/
pipelines
/ retrieve_config.py
2013-12-17
Diane Trout
Merge branch 'django1.4'
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2013-10-17
Diane Trout
Merge branch 'master' into django1.4
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2013-10-17
Diane Trout
Dynamically respond to the number of lanes.
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2013-01-09
Diane Trout
A better resolution to a possible circular dependency.
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2012-04-13
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
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2012-04-12
Diane Trout
Extend the adapter id field to support the dual indexed...
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2011-11-05
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
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2011-11-04
Diane Trout
Use a logger initialized to the module name much more...
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2011-10-21
Diane Trout
Yes generate regular gerald config file.
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2011-09-19
Diane Trout
Output samples that don't have index sequence as well.
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2011-09-19
Diane Trout
Python 2.6's DictWriter doesn't have writeheader, so...
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2011-09-17
Diane Trout
Add support for tracking the multiplex index sequence.
0.5.4
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2010-11-01
Diane Trout
Only complane about missing genomes if we _wanted_...
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2010-10-27
Diane Trout
The WITH_SEQUENCE flag needs to be lower-case "true".
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2010-10-19
Diane Trout
Set WITH_SEQUENCE as both a per-lane AND global parameter
0.4.5
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2010-10-08
Diane Trout
WITH_SEQUENCE is actually a global GERALD option, remov...
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2010-10-07
Diane Trout
Update gerald config file generation.
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2010-06-10
Diane Trout
Move the knowledge of the urls for the REST API to...
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2010-02-22
Diane Trout
there is no such thing as sequence_extended. I was...
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2009-11-10
Diane Trout
Don't add the post_run_command unless the option and...
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2009-10-17
Diane Trout
Figure out the absolute path to the runfolder for passi...
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2009-10-06
Diane Trout
Use eland_extended or eland_pair instead of eland for...
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2009-10-06
Diane Trout
Default to sequencing if we don't have a genome for...
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2009-09-26
Diane Trout
The config file should also set the SEQUENCE_FORMAT
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2009-09-26
Diane Trout
HttpRequest.getcode doesn't exist in python 2.4, use...
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2009-09-26
Diane Trout
Implement a client side config file generator.
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2009-09-16
Diane Trout
Replace some prints with logging.info messages and
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2009-02-12
Diane Trout
make our API docstrings more epydoc friendly
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2008-12-23
Diane Trout
Use the right URLError attribute names for error messages
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2008-10-15
Diane Trout
rename pipeline to pipelines to imply that we can proce...
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