qui/PathWindow.cxx

   1 #include "qui/PathWindow.h"
   2
   3 #include <QAction>
   4 #include <QDir>
   5 #include <QFileDialog>
   6 #include <QMenuBar>
   7 #include <QMessageBox>
   8 #include <QStatusBar>
   9 #include <QString>
  10 #include <QToolBar>
  11
  12 #include "qui/PathScene.h"
  13 #include "qui/ThresholdWidget.h"
  14
  15 #include <iostream>
  16
  17 PathWindow::PathWindow(QWidget *) :
  18   closeAction(0) // initialize one of the pointers to null as a saftey flag
  19 {
  20   setupActions();
  21   setupMainMenu();
  22
  23   scene = new PathScene(10000, 10, this);
  24   setCentralWidget(scene);
  25
  26   mussaViewTB = new QToolBar("Path Views");
  27   mussaViewTB->addAction(toggleMotifsAction);
  28
  29   ThresholdWidget *threshold = new ThresholdWidget;
  30   threshold->setRange(21, 30);
  31   scene->setClipPlane(21);
  32   connect(threshold, SIGNAL(thresholdChanged(int)),
  33           scene, SLOT(setClipPlane(int)));
  34   mussaViewTB->addWidget(threshold);
  35   addToolBar(mussaViewTB);
  36
  37   statusBar()->showMessage("Welcome to mussa", 2000);
  38 }
  39
  40 void PathWindow::setupActions()
  41 {
  42   // we really don't want to run this more than once.
  43   assert (closeAction == 0);
  44
  45   // the ever popular about box
  46   aboutAction = new QAction(tr("&About"), this);
  47   connect(aboutAction, SIGNAL(triggered()), this, SLOT(about()));
  48
  49   // add exit
  50   closeAction = new QAction(tr("&Close"), this);
  51   closeAction->setStatusTip(tr("Close this window"));
  52   connect(closeAction, SIGNAL(triggered()), this, SLOT(close()));
  53
  54   createNewAnalysisAction = new QAction(tr("Define Analysis"), this);
  55   connect(createNewAnalysisAction, SIGNAL(triggered()),
  56           this, SLOT(createNewAnalysis()));
  57
  58   createSubAnalysisAction = new QAction(tr("Define SubAnalysis"), this);
  59   connect(createSubAnalysisAction, SIGNAL(triggered()),
  60           this, SLOT(createSubAnalysis()));
  61
  62   loadMotifListAction = new QAction(tr("Load Motif List"), this);
  63   connect(loadMotifListAction, SIGNAL(triggered()),
  64           this, SLOT(loadMotifList()));
  65
  66   loadMupaAction = new QAction(tr("Load Mussa Parameters"), this);
  67   connect(loadMupaAction, SIGNAL(triggered()),
  68           this, SLOT(loadMupa()));
  69
  70   loadSavedAnalysisAction = new QAction(tr("Load &Analysis"), this);
  71   connect(loadSavedAnalysisAction, SIGNAL(triggered()),
  72           this, SLOT(loadSavedAnalysis()));
  73
  74   saveMotifListAction = new QAction(tr("Save Motifs"), this);
  75   connect(saveMotifListAction, SIGNAL(triggered()),
  76           this, SLOT(saveMotifList()));
  77
  78   showMussaViewToolbarAction = new QAction(tr("Show Toolbar"), this);
  79   connect(showMussaViewToolbarAction, SIGNAL(triggered()),
  80           this, SLOT(showMussaToolbar()));
  81
  82   toggleMotifsAction = new QAction(tr("Toggle Motifs"), this);
  83   connect(toggleMotifsAction, SIGNAL(triggered()),
  84           this, SLOT(toggleMotifs()));
  85 }
  86
  87 void PathWindow::setupMainMenu()
  88 {
  89   // we need to run setupActions first
  90   assert (closeAction != 0);
  91
  92   QMenu *newMenu;
  93   newMenu = menuBar()->addMenu(tr("&File"));
  94   newMenu->addAction(createNewAnalysisAction);
  95   newMenu->addAction(loadMupaAction);
  96   newMenu->addAction(loadSavedAnalysisAction);
  97   newMenu->addAction(createSubAnalysisAction);
  98   newMenu->addSeparator();
  99   newMenu->addAction(loadMotifListAction);
 100   newMenu->addAction(saveMotifListAction);
 101   newMenu->addSeparator();
 102   newMenu->addAction(closeAction);
 103
 104   newMenu = menuBar()->addMenu(tr("&View"));
 105   newMenu->addAction(showMussaViewToolbarAction);
 106
 107   newMenu = menuBar()->addMenu(tr("&Help"));
 108   newMenu->addAction(aboutAction);
 109 }
 110
 111 void PathWindow::about()
 112 {
 113   QMessageBox::about(this, tr("About mussa"),
 114       tr("Welcome to Multiple Species Sequence Analysis\n"
 115          "(c) 2005-2006 California Institute of Technology\n"
 116          "Tristan De Buysscher, Diane Trout\n"));
 117 }
 118
 119 void PathWindow::createNewAnalysis()
 120 {
 121   NotImplementedBox();
 122 }
 123
 124 void PathWindow::createSubAnalysis()
 125 {
 126   NotImplementedBox();
 127 }
 128
 129 void PathWindow::loadMotifList()
 130 {
 131   NotImplementedBox();
 132 }
 133
 134 void PathWindow::loadMupa()
 135 {
 136   QString caption("Load a mussa parameter file");
 137   QString filter("Mussa Parameters (*.mupa)");
 138   QString mupa_path = QFileDialog::getOpenFileName(this,
 139                                                    caption,
 140                                                    QDir::currentPath(),
 141                                                    filter);
 142   mussaAnalysis.load_mupa_file(mupa_path.toStdString());
 143 }
 144
 145 void PathWindow::loadSavedAnalysis()
 146 {
 147   NotImplementedBox();
 148 }
 149
 150 void PathWindow::saveMotifList()
 151 {
 152   NotImplementedBox();
 153 }
 154
 155 void PathWindow::showMussaToolbar()
 156 {
 157   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 158   mussaViewTB->show();
 159   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 160 }
 161
 162 void PathWindow::toggleMotifs()
 163 {
 164   NotImplementedBox();
 165 }
 166
 167 void PathWindow::NotImplementedBox()
 168 {
 169   QMessageBox::warning(this, QObject::tr("mussa"), QObject::tr("Not implemented yet"));
 170 }
 171
 172