qui/PathWindow.cxx

   1 #include "qui/PathWindow.h"
   2
   3 #include <QAction>
   4 #include <QDir>
   5 #include <QFileDialog>
   6 #include <QMenuBar>
   7 #include <QMessageBox>
   8 #include <QStatusBar>
   9 #include <QString>
  10 #include <QToolBar>
  11
  12 #include "qui/PathScene.h"
  13 #include "qui/ThresholdWidget.h"
  14
  15 PathWindow::PathWindow(QWidget *) :
  16   closeAction(0) // initialize one of the pointers to null as a saftey flag
  17 {
  18   setupActions();
  19   setupMainMenu();
  20
  21   scene = new PathScene(10000, 10, this);
  22   setCentralWidget(scene);
  23
  24   mussaViewTB = new QToolBar("Path Views");
  25   mussaViewTB->addAction(toggleMotifsAction);
  26
  27   ThresholdWidget *threshold = new ThresholdWidget;
  28   threshold->setRange(21, 30);
  29   scene->setClipPlane(21);
  30   connect(threshold, SIGNAL(thresholdChanged(int)),
  31           scene, SLOT(setClipPlane(int)));
  32   mussaViewTB->addWidget(threshold);
  33   addToolBar(mussaViewTB);
  34
  35   statusBar()->showMessage("Welcome to mussa", 2000);
  36 }
  37
  38 void PathWindow::setupActions()
  39 {
  40   // we really don't want to run this more than once.
  41   assert (closeAction == 0);
  42
  43   // the ever popular about box
  44   aboutAction = new QAction(tr("&About"), this);
  45   connect(aboutAction, SIGNAL(triggered()), this, SLOT(about()));
  46
  47   // add exit
  48   closeAction = new QAction(tr("&Close"), this);
  49   closeAction->setStatusTip(tr("Close this window"));
  50   connect(closeAction, SIGNAL(triggered()), this, SLOT(close()));
  51
  52   createNewAnalysisAction = new QAction(tr("Define Analysis"), this);
  53   connect(createNewAnalysisAction, SIGNAL(triggered()),
  54           this, SLOT(createNewAnalysis()));
  55
  56   createSubAnalysisAction = new QAction(tr("Define SubAnalysis"), this);
  57   connect(createSubAnalysisAction, SIGNAL(triggered()),
  58           this, SLOT(createSubAnalysis()));
  59
  60   loadMotifListAction = new QAction(tr("Load Motif List"), this);
  61   connect(loadMotifListAction, SIGNAL(triggered()),
  62           this, SLOT(loadMotifList()));
  63
  64   loadMupaAction = new QAction(tr("Load Mussa Parameters"), this);
  65   connect(loadMupaAction, SIGNAL(triggered()),
  66           this, SLOT(loadMupa()));
  67
  68   loadSavedAnalysisAction = new QAction(tr("Load &Analysis"), this);
  69   connect(loadSavedAnalysisAction, SIGNAL(triggered()),
  70           this, SLOT(loadSavedAnalysis()));
  71
  72   saveMotifListAction = new QAction(tr("Save Motifs"), this);
  73   connect(saveMotifListAction, SIGNAL(triggered()),
  74           this, SLOT(saveMotifList()));
  75
  76   toggleMotifsAction = new QAction(tr("Toggle Motifs"), this);
  77   connect(toggleMotifsAction, SIGNAL(triggered()),
  78           this, SLOT(toggleMotifs()));
  79 }
  80
  81 void PathWindow::setupMainMenu()
  82 {
  83   // we need to run setupActions first
  84   assert (closeAction != 0);
  85
  86   QMenu *newMenu;
  87   newMenu = menuBar()->addMenu(tr("&File"));
  88   newMenu->addAction(createNewAnalysisAction);
  89   newMenu->addAction(loadMupaAction);
  90   newMenu->addAction(loadSavedAnalysisAction);
  91   newMenu->addAction(createSubAnalysisAction);
  92   newMenu->addSeparator();
  93   newMenu->addAction(loadMotifListAction);
  94   newMenu->addAction(saveMotifListAction);
  95   newMenu->addSeparator();
  96   newMenu->addAction(closeAction);
  97
  98   newMenu = menuBar()->addMenu(tr("&Help"));
  99   newMenu->addAction(aboutAction);
 100 }
 101
 102 void PathWindow::about()
 103 {
 104   QMessageBox::about(this, tr("About mussa"),
 105       tr("Welcome to Multiple Species Sequence Analysis\n"
 106          "(c) 2005-2006 California Institute of Technology\n"
 107          "Tristan De Buysscher, Diane Trout\n"));
 108 }
 109
 110 void PathWindow::createNewAnalysis()
 111 {
 112   NotImplementedBox();
 113 }
 114
 115 void PathWindow::createSubAnalysis()
 116 {
 117   NotImplementedBox();
 118 }
 119
 120 void PathWindow::loadMotifList()
 121 {
 122   NotImplementedBox();
 123 }
 124
 125 void PathWindow::loadMupa()
 126 {
 127   QString caption("Load a mussa parameter file");
 128   QString filter("Mussa Parameters (*.mupa)");
 129   QString mupa_path = QFileDialog::getOpenFileName(this,
 130                                                    caption,
 131                                                    QDir::currentPath(),
 132                                                    filter);
 133   mussaAnalysis.load_mupa_file(mupa_path.toStdString());
 134 }
 135
 136 void PathWindow::loadSavedAnalysis()
 137 {
 138   NotImplementedBox();
 139 }
 140
 141 void PathWindow::saveMotifList()
 142 {
 143   NotImplementedBox();
 144 }
 145
 146 void PathWindow::toggleMotifs()
 147 {
 148   NotImplementedBox();
 149 }
 150
 151 void PathWindow::NotImplementedBox()
 152 {
 153   QMessageBox::warning(this, QObject::tr("mussa"), QObject::tr("Not implemented yet"));
 154 }
 155
 156