qui/test/TestSequenceDescription.hpp

   1 #ifndef _TEST_SEQUENCE_DESCRIPTION_HPP_
   2 #define _TEST_SEQUENCE_DESCRIPTION_HPP_
   3
   4 #include <QtGui>
   5 #include <QtTest/QtTest>
   6
   7 #include "alg/sequence.hpp"
   8 #include "alg/glsequence.hpp"
   9 #include "alg/annotation_colors.hpp"
  10 #include "qui/seqbrowser/SequenceDescription.hpp"
  11
  12 #include <iostream>
  13 #include <string>
  14 #include <vector>
  15
  16 class TestSequenceDescription : public QObject
  17 {
  18   Q_OBJECT
  19
  20 private slots:
  21   void testSimple() {
  22     boost::shared_ptr<Sequence> seq1(new Sequence("AAGGCCTT"));
  23     seq1->set_species("foo");
  24     boost::shared_ptr<AnnotationColors> cm(new AnnotationColors);
  25     boost::shared_ptr<GlSequence> glseq1(new GlSequence(seq1, cm));
  26
  27     SequenceDescription sd(glseq1, 0);
  28     QVERIFY(sd.glsequence() == glseq1);
  29     QVERIFY(sd.glsequence()->sequence()->get_species() == seq1->get_species());
  30     sd.setName(std::string("bar"));
  31     QVERIFY(sd.glsequence()->sequence()->get_species() == seq1->get_species());
  32     QVERIFY(seq1->get_species() == "bar");
  33   }
  34   void testDeletedPointer() {
  35     SequenceDescription sd;
  36
  37     {
  38       boost::shared_ptr<Sequence> seq1(new Sequence("AAGGCCTT"));
  39       Sequence m("AAGG");
  40       seq1->find_motif(m);
  41       seq1->set_species("foo");
  42       boost::shared_ptr<AnnotationColors> cm(new AnnotationColors);
  43       boost::shared_ptr<GlSequence> glseq1(new GlSequence(seq1, cm));
  44       sd.setGlSequence(glseq1);
  45     }
  46
  47     QVERIFY(sd.name() == "foo");
  48   }
  49 };
  50 #endif