Update mussa to build on ubuntu 10.04 with qt 4.6.2 +boost 1.40.0.1

[mussa.git] / alg / CMakeLists.txt

diff --git a/alg/CMakeLists.txt b/alg/CMakeLists.txt
index 5d36611b1abd464b006234ede090853714be18d6..83315dca6333bf4438a4e672f2e7b5d2ca1cb517 100644 (file)
--- a/alg/CMakeLists.txt
+++ b/alg/CMakeLists.txt
@@ -1,5 +1,10 @@
 FIND_PACKAGE(OpenGL )
-FIND_PACKAGE(Boost REQUIRED)
+
+set(Boost_USE_STATIC_LIBS   OFF)
+set(Boost_USE_MULTITHREADED ON)
+FIND_PACKAGE(Boost 1.34.1 REQUIRED filesystem unit_test_framework
+                                                               serialization system program_options )
+FIND_PACKAGE(Boost 1.3.4.1 COMPONENTS python )
 FIND_PACKAGE(Qt4)
 INCLUDE( ${QT_USE_FILE} )
 INCLUDE( Platform )
@@ -10,18 +15,24 @@ SET(MOC_HEADERS
    )
 QT4_WRAP_CPP(MOC_SOURCES ${MOC_HEADERS})
 
-SET(SOURCES annotation_colors.cpp 
+SET(SOURCES alphabet.cpp
+            annotations.cpp
+            annotation_colors.cpp 
             color.cpp 
             conserved_path.cpp 
             flp.cpp 
             flp_seqcomp.cpp 
             glseqbrowser.cpp 
             glsequence.cpp 
+            io.cpp
             mussa.cpp 
+            motif_parser.cpp 
             nway_entropy.cpp
             nway_other.cpp 
             nway_paths.cpp
             parse_options.cpp 
+            seq.cpp
+            seq_span.cpp
             sequence.cpp
             sequence_location.cpp )
 
@@ -35,12 +46,9 @@ SET_SOURCE_FILES_PROPERTIES(
 
 ADD_LIBRARY( mussa_core STATIC ${SOURCES} ${MOC_SOURCES})
 INCLUDE_DIRECTORIES(${OPENGL_INCLUDE_DIR}
-                    ${BOOST_INCLUDE_DIR}
-                    ${QT_INCLUDES})
-
-TARGET_LINK_LIBRARIES(mussa_core 
-                        ${OPEN_gl_LIBRARY}
-                        ${QT_LIBRARIES})
+                    ${Boost_INCLUDE_DIR}
+                    ${QT_INCLUDES}
+                    ${CMAKE_CURRENT_SOURCE_DIR})
 
 SET_TARGET_PROPERTIES(
   mussa_core PROPERTIES