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remove annot class in favor of SeqSpan
[mussa.git]
/
alg
/
glsequence.cpp
diff --git
a/alg/glsequence.cpp
b/alg/glsequence.cpp
index eb6cfe94574b49496dea22ca11e8498a5585f377..340a9ada0719b475753e9780fb082fbfe974a5d1 100644
(file)
--- a/
alg/glsequence.cpp
+++ b/
alg/glsequence.cpp
@@
-256,14
+256,14
@@
void GlSequence::draw_annotations(GLfloat left, GLfloat right) const
{
// draw annotations
GLfloat annotation_z = z() + 10.0;
{
// draw annotations
GLfloat annotation_z = z() + 10.0;
- const
std::list<annot>
& annots = Sequence::annotations();
+ const
SeqSpanRefList
& annots = Sequence::annotations();
const MotifList& motifs = Sequence::motifs();
const MotifList& motifs = Sequence::motifs();
- for (
std::list<annot>
::const_iterator annot_itor = annots.begin();
+ for (
SeqSpanRefList
::const_iterator annot_itor = annots.begin();
annot_itor != annots.end();
++annot_itor)
{
glColor3f(0.0, 0.8, 0.0);
annot_itor != annots.end();
++annot_itor)
{
glColor3f(0.0, 0.8, 0.0);
- draw_box(left, right, x()+
annot_itor->begin, x()+annot_itor->end
,
+ draw_box(left, right, x()+
(*annot_itor)->start(), x()+(*annot_itor)->stop()
,
height(), annotation_z);
}
// if motifs?
height(), annotation_z);
}
// if motifs?