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Mark real sequence instead of Ns
[mussa.git]
/
alg
/
glsequence.hpp
diff --git
a/alg/glsequence.hpp
b/alg/glsequence.hpp
index 190401a956644ddc3aed36af42857be5bba7715f..b772cd2fa75e77510e1c2128fd2f5af5db4f06d9 100644
(file)
--- a/
alg/glsequence.hpp
+++ b/
alg/glsequence.hpp
@@
-36,7
+36,7
@@
public:
static DrawableRef copy_drawable(DrawableRef s);
//! search through sequence and add an annotation highlighting all the non AGCT characters
static DrawableRef copy_drawable(DrawableRef s);
//! search through sequence and add an annotation highlighting all the non AGCT characters
- void add_annotations_for_
un
defined_sequence(Drawable::draw_func_ptr draw=0);
+ void add_annotations_for_defined_sequence(Drawable::draw_func_ptr draw=0);
//! set our starting x (horizontal) coordinate
void setX(float x);
//! get our starting x (horizontal) coordinate
//! set our starting x (horizontal) coordinate
void setX(float x);
//! get our starting x (horizontal) coordinate
@@
-63,7
+63,8
@@
public:
static
void draw_box(GLfloat world_left, GLfloat world_right,
GLfloat left, GLfloat right, GLfloat height,
static
void draw_box(GLfloat world_left, GLfloat world_right,
GLfloat left, GLfloat right, GLfloat height,
- GLfloat y, GLfloat z);
+ GLfloat y, GLfloat z,
+ GLint primitive=GL_QUADS);
//! draw a track
/*! left and right are the edges of the current viewport
*/
//! draw a track
/*! left and right are the edges of the current viewport
*/
@@
-129,5
+130,6
@@
protected:
void draw_sequence(GLfloat, GLfloat) const;
};
void draw_sequence(GLfloat, GLfloat) const;
};
+void draw_track(SeqSpanRef ref, float left, float right);
void draw_narrow_track(SeqSpanRef ref, float left, float right);
#endif
void draw_narrow_track(SeqSpanRef ref, float left, float right);
#endif