Store Sequence sequence location in a shared_ptr class

[mussa.git] / alg / motif_parser.cpp

diff --git a/alg/motif_parser.cpp b/alg/motif_parser.cpp
index 633e905bd07f1f83d7d3636ab857e42babf0a1cf..d05f15bbd55410ec1b2e76c94ce5114b6cb85a68 100644 (file)
--- a/alg/motif_parser.cpp
+++ b/alg/motif_parser.cpp
@@ -74,7 +74,8 @@ void motif_parser::push_motif::operator()(
     break;
   }
   Color c(red, green, blue, alpha);
-  parsed->color_mapper->appendInstanceColor("motif", seq.c_str(), c);
+  std::string motif_subseq(seq.begin(), seq.end());
+  parsed->color_mapper->appendInstanceColor("motif", motif_subseq, c);
   parsed->motifs.insert(seq);
   
   parsed->sequence.clear();
@@ -129,4 +130,4 @@ void motif_parser::ParsedMotifs::parse(const std::string &data)
     motifs.clear();
     throw motif_load_error(msg.str());
   }
-}
\ No newline at end of file
+}