threshold = atoi(tokens[1].c_str());
} else if (tokens[0] == "SEQUENCE") {
if (parsing_state == INSEQUENCE) {
- cout << "seq_file_name call2" << seq_file << endl;
load_sequence(seq_file, annot_file, fasta_index, sub_seq_start,
sub_seq_end);
parsing_state = START;