ticket:62 fix local alignment

[mussa.git] / alg / nway_entropy.cpp

diff --git a/alg/nway_entropy.cpp b/alg/nway_entropy.cpp
index 13a42c5b6ccd4b1e6357b952e9673d2f17e95fb6..1d9870a4aa0ed3cf05926e5c8e908f68d566c86e 100644 (file)
--- a/alg/nway_entropy.cpp
+++ b/alg/nway_entropy.cpp
@@ -196,7 +196,7 @@ NwayPaths::entropy_path_search(vector<vector<FLPs> > all_comparisons)
         // check entropy <---------------------------------------------------
         avg_entropy = path_entropy(path);
         if (avg_entropy <= ent_thres)
-          pathz.push_back(ConservedPath(avg_entropy, path));
+          pathz.push_back(ConservedPath(win_size, avg_entropy, path));
         
         // now advance the right iterator
         not_advanced = true;