remove commented out string conversion

[mussa.git] / alg / sequence.hpp

diff --git a/alg/sequence.hpp b/alg/sequence.hpp
index 6c5b3b62018ce87f100c0a66ee78d80922f4b6ff..b335dcd1dfac1401ce473ef22258334b705d0cd5 100644 (file)
--- a/alg/sequence.hpp
+++ b/alg/sequence.hpp
@@ -129,10 +129,6 @@ public:
   //! assignment to constant sequences
   Sequence &operator=(const Sequence&);
 
-  // dangerous since they create large copies
-  //operator std::string();
-  //operator std::string() const;
-
   friend std::ostream& operator<<(std::ostream&, const Sequence&);
   friend bool operator<(const Sequence&, const Sequence&);
   friend bool operator==(const Sequence&, const Sequence&);
@@ -229,8 +225,10 @@ public:
 private:
   boost::shared_ptr<seq_string> seq;
   std::string header;
+  //! species name
   std::string species;
 
+  //! store our oldstyle annotations
   std::list<annot> annots;
   //! a seperate list for motifs since we're currently not saving them
   std::list<motif> motif_list;