add annot and motif classes to python interface

[mussa.git] / alg / sequence.hpp

diff --git a/alg/sequence.hpp b/alg/sequence.hpp
index eceb961c93a5752b5b248fb97d52a704cd3dcd84..c576c3eb45de72f600b2e0d12abaff5361f9f7cf 100644 (file)
--- a/alg/sequence.hpp
+++ b/alg/sequence.hpp
@@ -27,10 +27,10 @@
 struct annot
 {
   annot();
-  annot(int start, int end, std::string type, std::string name);
+  annot(int begin, int end, std::string type, std::string name);
   ~annot();
   
-  int start;
+  int begin;
   int end;
   std::string type;
   std::string name;
@@ -46,7 +46,7 @@ struct motif : public annot
   std::string sequence;
 
   //! this constructor is for when we're adding motifs to our annotations
-  motif(int start, std::string motif);
+  motif(int begin, std::string motif);
   ~motif();
 };