Update mussa to build on ubuntu 10.04 with qt 4.6.2 +boost 1.40.0.1

[mussa.git] / alg / test / test_flp.cpp

diff --git a/alg/test/test_flp.cpp b/alg/test/test_flp.cpp
index 4706e8de6af5b46511f7d4f0cbd09887be8a974b..54aa76a9ad18d6495ae01c77cf328f4a2c4cc05f 100644 (file)
--- a/alg/test/test_flp.cpp
+++ b/alg/test/test_flp.cpp
@@ -1,7 +1,10 @@
+#define BOOST_TEST_DYN_LINK
+#define BOOST_TEST_MODULE test_flp
+#include <boost/test/auto_unit_test.hpp>
+
 #include <iostream>
 #include <list>
 
-#include <boost/test/auto_unit_test.hpp>
 #include <boost/filesystem/operations.hpp>
 #include <boost/filesystem/path.hpp>
 namespace fs = boost::filesystem;
@@ -88,13 +91,13 @@ BOOST_AUTO_TEST_CASE( flp_reverse_compliment )
   Sequence s1("AAAATTTT");
   Sequence s2("AACAGGGG");
   f1.setup(4,3);
-  f1.seqcomp(s1.get_seq(), s2.get_seq(), false);
-  f1.seqcomp(s1.get_seq(), s2.rev_comp(), true);
+  f1.seqcomp(s1, s2, false);
+  f1.seqcomp(s1, s2.rev_comp(), true);
 
   FLPs f2;
   f2.setup(4,3);
-  f2.seqcomp(s1.get_seq(), s2.rev_comp(), true);
-  f2.seqcomp(s1.get_seq(), s2.get_seq(), false);
+  f2.seqcomp(s1, s2.rev_comp(), true);
+  f2.seqcomp(s1, s2, false);
 
   // The order of doing the reverse compliment search shouldn't matter
   // when we're using exactly the same sequence