#include <boost/assign/std/vector.hpp>
using namespace boost::assign;
+#include <boost/shared_ptr.hpp>
+
#include <string>
#include <list>
#include <vector>
string s0("AAGGCCTT");
string s1("TTGGCCAA");
string s2("GATTACAA");
- Sequence seq0(s0);
- Sequence seq1(s1);
- Sequence seq2(s2);
- AnnotationColors cm;
+ boost::shared_ptr<Sequence> seq0(new Sequence(s0));
+ boost::shared_ptr<Sequence> seq1(new Sequence(s1));
+ boost::shared_ptr<Sequence> seq2(new Sequence(s2));
+ boost::shared_ptr<AnnotationColors> cm(new AnnotationColors);
GlSequence glseq0(seq0, cm);
GlSequence glseq1(seq1, cm);
GlSequence glseq2(seq2, cm);