More progress toward subanalysis

[mussa.git] / alg / test / test_nway.cpp

diff --git a/alg/test/test_nway.cpp b/alg/test/test_nway.cpp
index 4131f83ab3c1ac65a86b71825f586efd97c62927..22c84dd712a556f7609d8bee64e884c8725f67f9 100644 (file)
--- a/alg/test/test_nway.cpp
+++ b/alg/test/test_nway.cpp
@@ -19,9 +19,9 @@ BOOST_AUTO_TEST_CASE( nway_null )
   string s2("TTTTNNNN");
 
   Mussa analysis;
-  analysis.add_a_seq(s0);
-  analysis.add_a_seq(s1);
-  analysis.add_a_seq(s2);
+  analysis.append_sequence(s0);
+  analysis.append_sequence(s1);
+  analysis.append_sequence(s2);
   analysis.set_window(4);
   analysis.set_threshold(3);
   analysis.analyze();
@@ -42,8 +42,8 @@ BOOST_AUTO_TEST_CASE( nway_test )
   Sequence seq1(s1);
 
   Mussa analysis;
-  analysis.add_a_seq(s0);
-  analysis.add_a_seq(s1);
+  analysis.append_sequence(s0);
+  analysis.append_sequence(s1);
   analysis.set_window(4);
   analysis.set_threshold(3);
   analysis.analyze();
@@ -183,9 +183,9 @@ GTTTTAATAAATGCACAATGCTCTCTTCCTGTTCTTC";
 
   // now that we've got some data lets see if it crashes
   Mussa m1;
-  m1.add_a_seq(seq1);
-  m1.add_a_seq(seq2);
-  m1.add_a_seq(seq3);
+  m1.append_sequence(seq1);
+  m1.append_sequence(seq2);
+  m1.append_sequence(seq3);
 
   m1.set_window(10);
   m1.set_threshold(8);