public:
MussaWindow(Mussa* analysis=0, QWidget *parent=0);
+ ~MussaWindow();
//! switch to a new analysis
void setAnalysis(Mussa *new_analysis);
//! set the soft threshold used by the Nway_Path algorithm
void setSoftThreshold(int thres);
+ //! open a new mussa window so one can compare analyses
+ void newMussaWindow();
+
void showMussaToolbar();
//! open new window showing our alignment
QAction *loadMotifListAction;
QAction *loadMupaAction;
QAction *loadSavedAnalysisAction;
+ QAction *newMussaWindowAction;
QAction *saveMotifListAction;
QAction *showMussaViewToolbarAction;
QAction *toggleMotifsAction;