class SetupInfo
{
public:
- SetupInfo(std::string seqFile,
+ SetupInfo(std::string seqName,
+ std::string seqFile,
std::string annotFile,
int fastaIndex,
int subSeqStart=0,
int subSeqEnd=0);
+ std::string getName() { return seqName; };
std::string getSeqFile() { return seqFile; };
std::string getAnnotFile() { return annotFile; };
int getFastaIndex() { return fastaIndex; };
int getSubSeqEnd() { return subSeqEnd; };
private:
+ std::string seqName;
std::string seqFile;
std::string annotFile;
int fastaIndex;