center on path
authorDiane Trout <diane@caltech.edu>
Sat, 18 Mar 2006 08:23:15 +0000 (08:23 +0000)
committerDiane Trout <diane@caltech.edu>
Sat, 18 Mar 2006 08:23:15 +0000 (08:23 +0000)
commit305f9a01baaf833414bfe245ffbfde6dba4c6e19
tree30a62a192734259fd1f899de17a302da3aa3d48d
parente171f5dc2f6f0412f20ba2c8dcbd663790bddc37
center on path
This manages to make the various sequences line up along some provided path.
(a vector<int> listing the sequences positions).

This has problems because of the use of the negative flag to indicate
reverse compliment (as it moves the sequence the wrong direction).

Additionally to get this to work I had to get all of the glsequence code
necessary to allow non-zero x values.
13 files changed:
alg/conserved_path.cpp
alg/conserved_path.hpp
alg/glseqbrowser.cpp
alg/glseqbrowser.hpp
alg/glsequence.cpp
alg/glsequence.hpp
alg/nway_paths.hpp
alg/test/test_glseqbrowser.cpp
alg/test/test_glsequence.cpp
qui/MussaAlignedWindow.cpp
qui/MussaAlignedWindow.hpp
qui/seqbrowser/SequenceBrowserWidget.cpp
qui/seqbrowser/SequenceBrowserWidget.hpp