define window for showing a mussa alignment
authorDiane Trout <diane@caltech.edu>
Sat, 18 Mar 2006 02:01:58 +0000 (02:01 +0000)
committerDiane Trout <diane@caltech.edu>
Sat, 18 Mar 2006 02:01:58 +0000 (02:01 +0000)
commite171f5dc2f6f0412f20ba2c8dcbd663790bddc37
treed8438e0dc786f6e2ef72717fd7c52b78245b67bf
parenta657f6c85412e9483f3adadea22b510bd9956e25
define window for showing a mussa alignment
Create a new window to hold the mussa sequence alignment. (aka
show all the sequences lined up at a starting point with lines connecting
base pairs.)

(This also fixes a bug I introduced into the fltk version of mussa back
when I changed paths from just being a vector of ints into an actual
class.)

I still need to actually allow the user to pick the aligned path and show
the conserved base pairs.
16 files changed:
alg/conserved_path.cpp
alg/conserved_path.hpp
alg/glseqbrowser.cpp
alg/glseqbrowser.hpp
alg/test/test_conserved_path.cpp
gui/ConnView.cpp
gui/SeqView.cpp
gui/SeqWindow.cpp
mussagl.pro
qui/MussaAlignedWindow.cpp [new file with mode: 0644]
qui/MussaAlignedWindow.hpp [new file with mode: 0644]
qui/MussaWindow.cpp
qui/MussaWindow.hpp
qui/seqbrowser/SequenceBrowser.hpp
qui/seqbrowser/SequenceBrowserWidget.cpp
qui/seqbrowser/SequenceBrowserWidget.hpp