define window for showing a mussa alignment

[mussa.git] / alg / glseqbrowser.hpp

diff --git a/alg/glseqbrowser.hpp b/alg/glseqbrowser.hpp
index fa337a5a25ee9f6665e1113a9d705a85b8e0c123..af7efdc78d3b3630b195ce05b89aa0be4548a16d 100644 (file)
--- a/alg/glseqbrowser.hpp
+++ b/alg/glseqbrowser.hpp
@@ -58,6 +58,8 @@ public:
   void clear_links();
   //! define a path
   void link(const std::vector<int>& path, const std::vector<bool>& isRC, int length);
+  //! returns the index of pathids based on order added by link
+  const std::set<int>& selectedPaths() const;
 
   //! Provide a logical name for a type discriminator for our glName stack
   enum FeatureType { MussaTrack, MussaSegment };
@@ -151,9 +153,9 @@ protected:
   //! true if we have a selection
   bool selectedMode;
   //! indicate which paths are selected
-  std::set<int> selectedPaths;
+  std::set<int> selected_paths;
   //! which track is selected (it only makes sense to have one track selected).
-  std::set<int> selectedTracks;
+  std::set<int> selected_tracks;
 
 };
 #endif