Imported Upstream version 0.5

[pysam.git] / tabix / tabix.h

diff --git a/tabix/tabix.h b/tabix/tabix.h
index 4390c0918023936c5e8f17016d6f5532ac84b313..7b4497a35676b494d8bf1c600601b2945545b8b9 100644 (file)
--- a/tabix/tabix.h
+++ b/tabix/tabix.h
@@ -58,6 +58,11 @@ typedef struct {
        int32_t meta_char, line_skip;
 } ti_conf_t;
 
+typedef struct {
+       int beg, end;
+       char *ss, *se;
+} ti_interval_t;
+
 extern ti_conf_t ti_conf_gff, ti_conf_bed, ti_conf_psltbl, ti_conf_vcf, ti_conf_sam; // preset
 
 #ifdef __cplusplus
@@ -120,6 +125,9 @@ extern "C" {
        /* Get the data line pointed by the iterator and iterate to the next record. */
        const char *ti_iter_read(BGZF *fp, ti_iter_t iter, int *len);
 
+       const ti_conf_t *ti_get_conf(ti_index_t *idx);
+       int ti_get_intv(const ti_conf_t *conf, int len, char *line, ti_interval_t *intv);
+
        /*******************
         * Deprecated APIs *
         *******************/