4 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
6 Uploaders: Charles Plessy <plessy@debian.org>
7 Build-Depends: debhelper (>= 8), cdbs, quilt, libncurses5-dev, zlib1g-dev
8 Standards-Version: 3.9.2
9 Homepage: http://samtools.sourceforge.net
10 Vcs-Browser: http://git.debian.org/?p=debian-med/samtools.git
11 Vcs-Git: git://git.debian.org/debian-med/samtools.git
15 Depends: ${shlibs:Depends}, ${misc:Depends}
17 Description: processing sequence alignments in SAM and BAM formats
18 Samtools is a set of utilities that manipulate nucleotide sequence alignments
19 in the binary BAM format. It imports from and exports to the ascii SAM
20 (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows
21 to retrieve reads in any regions swiftly. It is designed to work on a stream,
22 and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.
27 Depends: ${shlibs:Depends}, ${misc:Depends}
28 Description: manipulates nucleotide sequence alignments in BAM or SAM format
29 The BAM library provides I/O and various operations on manipulating nucleotide
30 sequence alignments in the BAM (Binary Alignment/Mapping) or SAM (Sequence
31 Alignment/Map) format. It now supports importing from or exporting to SAM,
32 sorting, merging, generating pileup, and quickly retrieval of reads overlapped
33 with a specified region.
35 This library is part SAMtools.