1 Format: http://dep.debian.net/deps/dep5/
2 Source: http://sourceforge.net/projects/samtools/files/samtools/0.1.18/samtools-0.1.18.tar.bz2
5 Copyright: © 2008–2010, Genome Research Ltd. (GRL)
9 Files: kprobaln.h kprobaln.c
10 Copyright: © 2003-2006, 2008-2010, by Heng Li <lh3lh3@live.co.uk>
15 Copyright: © 2010 Broad Institute
19 Files: misc/export2sam.pl bam_cat.c
20 Copyright: © 2010 Illumina, Inc.
25 Copyright: © 2008 Broad Institute / Massachusetts Institute of Technology
30 Copyright: © 2008, 2009, 2011 by Attractive Chaos <attractor@live.co.uk>
34 Files: bcftools/kmin.?
35 Copyright: © 2008, 2010 by Attractive Chaos <attractor@live.co.uk>
40 Copyright: © 2008 by Genome Research Ltd (GRL).
41 2010 by Attractive Chaos <attractor@live.co.uk>
46 Copyright: © 2008 Genome Research Ltd (GRL)
47 © 2011 Heng Li <lh3@live.co.uk>
52 Copyright: 2008, Jue Ruan <ruanjue@gmail.com>, Heng Li <lh3@sanger.ac.uk>
53 License: NetBSD-similar
54 Redistribution and use in source and binary forms, with or without
55 modification, are permitted provided that the following conditions
57 1. Redistributions of source code must retain the above copyright
58 notice, this list of conditions and the following disclaimer.
59 2. Redistributions in binary form must reproduce the above copyright
60 notice, this list of conditions and the following disclaimer in the
61 documentation and/or other materials provided with the distribution.
63 THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
64 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
65 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
66 ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
67 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
68 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
69 OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
70 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
71 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
72 OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
74 Name: RAZF : Random Access compressed(Z) File
78 Copyright: no copyright is claimed
79 License: MD5-fourmilab
80 This code implements the MD5 message-digest algorithm.
81 The algorithm is due to Ron Rivest. This code was
82 written by Colin Plumb in 1993, no copyright is claimed.
83 This code is in the public domain; do with it what you wish.
85 Equivalent code is available from RSA Data Security, Inc.
86 This code has been tested against that, and is equivalent,
87 except that you don't need to include two pages of legalese
90 To compute the message digest of a chunk of bytes, declare an
91 MD5Context structure, pass it to MD5Init, call MD5Update as
92 needed on buffers full of bytes, and then call MD5Final, which
93 will fill a supplied 16-byte array with the digest.
96 Files: win32/xcurses.h
97 Copyright: Public Domain
98 License: public-domain
99 This file is part of PDCurses (http://pdcurses.sourceforge.net/),
100 which is in the public domain.
104 Copyright: © 1995-2005 Jean-loup Gailly and Mark Adler
106 This software is provided 'as-is', without any express or implied
107 warranty. In no event will the authors be held liable for any damages
108 arising from the use of this software.
110 Permission is granted to anyone to use this software for any purpose,
111 including commercial applications, and to alter it and redistribute it
112 freely, subject to the following restrictions:
114 1. The origin of this software must not be misrepresented; you must not
115 claim that you wrote the original software. If you use this software
116 in a product, an acknowledgment in the product documentation would be
117 appreciated but is not required.
118 2. Altered source versions must be plainly marked as such, and must not be
119 misrepresented as being the original software.
120 3. This notice may not be removed or altered from any source distribution.
122 Jean-loup Gailly Mark Adler
123 jloup@gzip.org madler@alumni.caltech.edu
127 Permission is hereby granted, free of charge, to any person obtaining a copy
128 of this software and associated documentation files (the "Software"), to deal
129 in the Software without restriction, including without limitation the rights
130 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
131 copies of the Software, and to permit persons to whom the Software is
132 furnished to do so, subject to the following conditions:
134 The above copyright notice and this permission notice shall be included in
135 all copies or substantial portions of the Software.
137 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
138 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
139 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
140 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
141 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
142 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN