Machine-readable license summary, see ‘http://dep.debian.net/deps/dep5/’.
+
Name : SAMtools
Contact : SAMtools mailing list <samtools-help@lists.sourceforge.net>
-Source : http://downloads.sourceforge.net/sourceforge/samtools/samtools-0.1.5c.tar.bz2
+Source : http://qa.debian.org/watch/sf.php/samtools/samtools-0.1.7a.tar.bz2
+
Copyright : © 2008–2009, Genome Research Ltd.
License : MIT
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
THE SOFTWARE.
+
+Files: misc/export2sam.pl
+Copyright : © 2008–2009, Genome Research Ltd.
+Copyright : © 2010 Illumina, Inc.
+License : MIT
+
+
Files : bgzf.*, bgzip.c
Copyright : © 2008 Broad Institute / Massachusetts Institute of Technology
License : MIT
-The license of the above files have been confirmed upstream and their headers
-will be corrected in the next release. See:
-http://samtools.svn.sourceforge.net/viewvc/samtools?view=rev&revision=441
-
Files : razf.*
Name : RAZF : Random Access compressed(Z) File
Files : misc/md5.*
-Name : MD5 Message Digest Algorithm
-Copyright : © 1990, RSA Data Security, Inc.
License :
- License to copy and use this software is granted provided that
- it is identified as the "RSA Data Security, Inc. MD5 Message
- Digest Algorithm" in all material mentioning or referencing this
- software or this function.
-
- License is also granted to make and use derivative works
- provided that such works are identified as "derived from the RSA
- Data Security, Inc. MD5 Message Digest Algorithm" in all
- material mentioning or referencing the derived work.
-
- RSA Data Security, Inc. makes no representations concerning
- either the merchantability of this software or the suitability
- of this software for any particular purpose. It is provided "as
- is" without express or implied warranty of any kind.
-
- These notices must be retained in any copies of any part of this
- documentation and/or software.
-
-The above source files for MD5 support will be replaced in the next SAMtools
-release by the public domain implementation of ‘http://www.fourmilab.ch/md5/’.
+ This code implements the MD5 message-digest algorithm.
+ The algorithm is due to Ron Rivest. This code was
+ written by Colin Plumb in 1993, no copyright is claimed.
+ This code is in the public domain; do with it what you wish.
+
+ Equivalent code is available from RSA Data Security, Inc.
+ This code has been tested against that, and is equivalent,
+ except that you don't need to include two pages of legalese
+ with every copy.
+
+ To compute the message digest of a chunk of bytes, declare an
+ MD5Context structure, pass it to MD5Init, call MD5Update as
+ needed on buffers full of bytes, and then call MD5Final, which
+ will fill a supplied 16-byte array with the digest.
+
+
+Files : win32/xcurses.h
+License : Public Domain
+
+ This file is part of PDCurses (http://pdcurses.sourceforge.net/),
+ which is in the public domain.
+
+
+Files : win32/z*.h
+Copyright : © 1995-2005 Jean-loup Gailly and Mark Adler
+License : zlib
+
+ This software is provided 'as-is', without any express or implied
+ warranty. In no event will the authors be held liable for any damages
+ arising from the use of this software.
+
+ Permission is granted to anyone to use this software for any purpose,
+ including commercial applications, and to alter it and redistribute it
+ freely, subject to the following restrictions:
+
+ 1. The origin of this software must not be misrepresented; you must not
+ claim that you wrote the original software. If you use this software
+ in a product, an acknowledgment in the product documentation would be
+ appreciated but is not required.
+ 2. Altered source versions must be plainly marked as such, and must not be
+ misrepresented as being the original software.
+ 3. This notice may not be removed or altered from any source distribution.
+
+ Jean-loup Gailly Mark Adler
+ jloup@gzip.org madler@alumni.caltech.edu