projects
/
tabix.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
Changelog entry marking the package released.
[tabix.git]
/
Makefile
diff --git
a/Makefile
b/Makefile
index 9013642bacc8a1ec2c93ff03a9e519f5ef202abd..9c8e9174c443990353ed1576c5d8cdc5ab399069 100644
(file)
--- a/
Makefile
+++ b/
Makefile
@@
-1,7
+1,7
@@
CC= gcc
CFLAGS= -g -Wall -O2 -fPIC #-m64 #-arch ppc
CC= gcc
CFLAGS= -g -Wall -O2 -fPIC #-m64 #-arch ppc
-DFLAGS= -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE
-LOBJS= bgzf.o kstring.o knetfile.o index.o
+DFLAGS= -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE
-DBGZF_CACHE
+LOBJS= bgzf.o kstring.o knetfile.o index.o
bedidx.o
AOBJS= main.o
PROG= tabix bgzip
INCLUDES=
AOBJS= main.o
PROG= tabix bgzip
INCLUDES=
@@
-35,10
+35,10
@@
libtabix.1.dylib:$(LOBJS)
libtool -dynamic $(LOBJS) -o $@ -lc -lz
libtabix.a:$(LOBJS)
libtool -dynamic $(LOBJS) -o $@ -lc -lz
libtabix.a:$(LOBJS)
- $(AR) -cru $@ $(LOBJS)
+ $(AR) -c
s
ru $@ $(LOBJS)
tabix:lib $(AOBJS)
tabix:lib $(AOBJS)
- $(CC) $(CFLAGS) -o $@ $(AOBJS) -
lm $(LIBPATH) -lz -L. -ltabix
+ $(CC) $(CFLAGS) -o $@ $(AOBJS) -
L. -ltabix -lm $(LIBPATH) -lz
bgzip:bgzip.o bgzf.o knetfile.o
$(CC) $(CFLAGS) -o $@ bgzip.o bgzf.o knetfile.o -lz
bgzip:bgzip.o bgzf.o knetfile.o
$(CC) $(CFLAGS) -o $@ bgzip.o bgzf.o knetfile.o -lz
@@
-52,6
+52,7
@@
bgzf.o:bgzf.h knetfile.h
index.o:bgzf.h tabix.h khash.h ksort.h kstring.h
main.o:tabix.h kstring.h bgzf.h
bgzip.o:bgzf.h
index.o:bgzf.h tabix.h khash.h ksort.h kstring.h
main.o:tabix.h kstring.h bgzf.h
bgzip.o:bgzf.h
+bedidx.o:kseq.h khash.h
tabix.pdf:tabix.tex
pdflatex tabix.tex
tabix.pdf:tabix.tex
pdflatex tabix.tex