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Imported Upstream version 0.1.5
[tabix.git]
/
Makefile
diff --git
a/Makefile
b/Makefile
index 3d7153d4a58bcfb8508eaef041f7f50d22e3191c..a51c1757ad139d7135da8ad42a8b71a01b66c04d 100644
(file)
--- a/
Makefile
+++ b/
Makefile
@@
-37,6
+37,9
@@
tabix:lib $(AOBJS)
bgzip:bgzip.o bgzf.o knetfile.o
$(CC) $(CFLAGS) -o $@ bgzip.o bgzf.o knetfile.o -lz
bgzip:bgzip.o bgzf.o knetfile.o
$(CC) $(CFLAGS) -o $@ bgzip.o bgzf.o knetfile.o -lz
+TabixReader.class:TabixReader.java
+ javac -cp .:sam.jar TabixReader.java
+
kstring.o:kstring.h
knetfile.o:knetfile.h
bgzf.o:bgzf.h knetfile.h
kstring.o:kstring.h
knetfile.o:knetfile.h
bgzf.o:bgzf.h knetfile.h
@@
-44,7
+47,10
@@
index.o:bgzf.h tabix.h khash.h ksort.h kstring.h
main.o:tabix.h kstring.h bgzf.h
bgzip.o:bgzf.h
main.o:tabix.h kstring.h bgzf.h
bgzip.o:bgzf.h
+tabix.pdf:tabix.tex
+ pdflatex tabix.tex
+
cleanlocal:
cleanlocal:
- rm -fr gmon.out *.o a.out *.dSYM $(PROG) *~ *.a
+ rm -fr gmon.out *.o a.out *.dSYM $(PROG) *~ *.a
tabix.aux tabix.log tabix.pdf *.class
clean:cleanlocal-recur
clean:cleanlocal-recur