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Imported Upstream version 0.1.2
[tabix.git]
/
tabix.1
diff --git
a/tabix.1
b/tabix.1
index 4b5eea25057be28b6a7fa749ef2272a14ebfb313..aa6dc75c9f0e7a4a14e93f27b5b45bb39b8c3eb3 100644
(file)
--- a/
tabix.1
+++ b/
tabix.1
@@
-69,8
+69,8
@@
are all stored in the index file and thus not used in data retrieval. [1]
Column of start chromosomal position. [4]
.TP
.BI "-e " INT
Column of start chromosomal position. [4]
.TP
.BI "-e " INT
-Column of end chromosomal position. The end column can be the same as
-start column
,
[5]
+Column of end chromosomal position. The end column can be the same as
the
+start column
.
[5]
.TP
.BI "-S " INT
Skip first INT lines in the data file. [0]
.TP
.BI "-S " INT
Skip first INT lines in the data file. [0]
@@
-84,7
+84,7
@@
rather than 1-based.
.RE
.SH EXAMPLE
.RE
.SH EXAMPLE
-
grep -v ^"#" unsorted.gff | sort -k1,1 -k4,4n | bgzip -c
> sorted.gff.gz;
+
(grep ^"#" in.gff; grep -v ^"#" in.gff | sort -k1,1 -k4,4n) | bgzip
> sorted.gff.gz;
tabix -p gff sorted.gff.gz;
tabix -p gff sorted.gff.gz;