test/testMakeBamFromRds.py

   1 '''
   2 Created on Jun 4, 2010
   3
   4 @author: sau
   5 '''
   6 import unittest
   7 from Erange import MakeBamFromRds
   8
   9
  10 class TestMakeBamFromRds(unittest.TestCase):
  11
  12
  13     def setUp(self):
  14         pass
  15
  16
  17     def tearDown(self):
  18         pass
  19
  20
  21     def testGetMismatches(self):
  22         mismatchString = "3A10T"
  23         self.assertEqual(mismatchString, MakeBamFromRds.getMismatches("A3G, T10A"))
  24
  25         mismatchString = ""
  26         self.assertEqual(mismatchString, MakeBamFromRds.getMismatches(""))
  27
  28
  29 def suite():
  30     suite = unittest.TestSuite()
  31     suite.addTest(unittest.makeSuite(TestMakeBamFromRds))
  32
  33     return suite
  34
  35
  36 if __name__ == "__main__":
  37     #import sys;sys.argv = ['', 'Test.testName']
  38     unittest.main()