pass
import sys
-from commoncode import readDataset
+import ReadDataset
-print '%s: version 1.1' % sys.argv[0]
+print "combinerds: version 1.2"
def main(argv=None):
print "destination RDS: %s" % datafile
if '--initrna' in argv:
- rds = readDataset(datafile, initialize=True, datasetType='RNA')
+ rds = ReadDataset.ReadDataset(datafile, initialize=True, datasetType='RNA')
elif '--init' in argv:
- rds = readDataset(datafile, initialize=True)
+ rds = ReadDataset.ReadDataset(datafile, initialize=True)
withFlag = ''
if '--flag' in argv:
withFlag = argv[sys.argv.index('-flag') + 1]
print "restrict to flag = %s" % withFlag
- rds = readDataset(datafile, verbose=True, cache=doCache)
+ rds = ReadDataset.ReadDataset(datafile, verbose=True, cache=doCache)
if cachePages > rds.getDefaultCacheSize():
rds.setDBcache(cachePages)