Also update model with link between illumina result files
and our target fastq file.
"""
- fastq_paired_template = '%(lib_id)s_%(flowcell)s_c%(cycle)s_l%(lane)s_r%(read)s.fastq'
- fastq_single_template = '%(lib_id)s_%(flowcell)s_c%(cycle)s_l%(lane)s.fastq'
# find what targets we're missing
needed_targets = {}
for seq in raw_files: